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0
votes
1
answer
4.0k
views
1
answer
Bed-To-Gff: Option For Gff3 Format
gff written 6.8 years ago by Karen Tang40
0
votes
2
answers
4.0k
views
2
answers
Tophat "Mean Inner Distance Between Mate Pairs"
galaxy written 5.8 years ago by 杨继文210 • updated 5.8 years ago by Jennifer Hillman Jackson23k
9
votes
5
answers
4.0k
views
5
answers
Error when install tool from galaxy tool shed
testtoolshed repository galaxy toolshed written 3.5 years ago by GPS20 • updated 3.5 years ago by Dave B.410
13
votes
2
answers
4.0k
views
2
answers
fastq files are't recognized by tools
rna-seq written 3.6 years ago by markus.wolfien50 • updated 3.0 years ago by dtabed0
0
votes
1
answer
4.0k
views
1
answer
Inquiry On Fastqc Report
bowtie alignment written 4.4 years ago by Ng Kiaw Kiaw10 • updated 4.4 years ago by Jennifer Hillman Jackson23k
4
votes
1
answer
3.9k
views
1
answer
1
vote
3
answers
3.9k
views
3
answers
rmdup - remove PCR duplicates from ChIP-seq data
chip-seq samtools written 3.6 years ago by david.fear10 • updated 3.6 years ago by Jennifer Hillman Jackson23k
0
votes
2
answers
3.9k
views
2
answers
Help!!! Cuffdiff Log2 Value
cuffdiff rna-seq written 5.6 years ago by 杨继文210 • updated 5.6 years ago by Jennifer Hillman Jackson23k
4
votes
3
answers
3.9k
views
3
answers
Tool: Merge Bam files
samtools tool written 3.6 years ago by david.fear10
5
votes
1
answer
3.9k
views
1
answer
Convert SAM to sorted BAM
bam samtools sam sort written 3.3 years ago by biomonika60 • updated 3.3 years ago by Jennifer Hillman Jackson23k
2
votes
1
answer
3.8k
views
1
answer
Cuffcompare Or Cuffmerge
cufflinks cuffmerge rna-seq written 5.6 years ago by 杨继文210 • updated 5.6 years ago by ericliaowei@gmail.com70
0
votes
2
answers
3.8k
views
2
answers
Production Galaxy Nginx Config
nginx galaxy production written 3.0 years ago by fire_water10 • updated 3.0 years ago by tuto34520
2
votes
1
answer
3.7k
views
5 follow
1
answer
Building Bowtie index, failed
rna-seq alignment tophat gff written 2.9 years ago by jingshuowang10 • updated 2.9 years ago by Bjoern Gruening4.8k
0
votes
1
answer
3.7k
views
1
answer
Bam To Bigwig
galaxy written 3.9 years ago by Susanne Warrenfeltz40 • updated 3.9 years ago by Jennifer Hillman Jackson23k
0
votes
1
answer
3.7k
views
1
answer
Fastq-Mcf
written 5.8 years ago by Benoît REMENANT10 • updated 5.7 years ago by Jennifer Hillman Jackson23k
1
vote
1
answer
3.7k
views
1
answer
Upload Data To Local Galaxy By Copying Them To The File Folder
galaxy written 5.2 years ago by Jerzy Dyczkowski40 • updated 5.2 years ago by Jennifer Hillman Jackson23k
3
votes
2
answers
3.7k
views
2
answers
Upload More Than 2Gb Data From Local Computer To Local Installation Of Galaxy
galaxy written 3.8 years ago by do kadya130 • updated 24 months ago by xunshengbu20
0
votes
3
answers
3.6k
views
3
answers
Extracting A Subset Of Sequences From A Very Large Fasta File(1.5 Million)
galaxy written 5.0 years ago by Perumal Vijayan10 • updated 4.9 years ago by Jim Robinson150
1
vote
1
answer
3.6k
views
1
answer
Peak Annotation With Galaxy
bowtie alignment written 4.0 years ago by Wooi Lim30 • updated 4.0 years ago by Jennifer Hillman Jackson23k
1
vote
2
answers
3.6k
views
2
answers
0
votes
1
answer
3.5k
views
1
answer
Demultiplex Miseq Data With Separate Index File.
galaxy written 5.8 years ago by Philip Dean10 • updated 5.8 years ago by Bossers, Alex240
0
votes
2
answers
3.5k
views
2
answers
5
votes
1
answer
3.5k
views
1
answer
0
votes
1
answer
3.4k
views
1
answer
Bowtie: Outputting Unmapped Reads
bowtie alignment written 4.4 years ago by Mayank Tandon40 • updated 4.4 years ago by Jennifer Hillman Jackson23k
4
votes
2
answers
3.4k
views
2
answers
Fastq Groomer
galaxy written 6.2 years ago by arabidopsis20 • updated 6.1 years ago by Jennifer Hillman Jackson23k
0
votes
1
answer
3.4k
views
1
answer
Depth Command In Sam Tools
bam samtools written 4.7 years ago by Els Willems30 • updated 4.7 years ago by Jennifer Hillman Jackson23k
0
votes
1
answer
3.4k
views
1
answer
1
vote
1
answer
3.3k
views
1
answer
Need help with "Convert genome coordinates" tool
convert-genome-coordinates written 3.4 years ago by hjs21210 • updated 3.4 years ago by Jennifer Hillman Jackson23k
0
votes
3
answers
3.3k
views
3
answers
Pre-Processing Of Illumina Rna-Seq Paired End Data
cuffdiff rna-seq written 5.8 years ago by Ravi Karra10 • updated 5.8 years ago by Victor Ruotti90
0
votes
2
answers
3.3k
views
2
answers
1
vote
1
answer
3.2k
views
1
answer
Variant Annotation In Galaxy
snp snpeff written 3.8 years ago by garzetti100 • updated 3.8 years ago by Jennifer Hillman Jackson23k
0
votes
2
answers
3.2k
views
2
answers
How To Find Out The Gene_Id Correspond To Cuff Id
written 6.8 years ago by Ying Zhang70 • updated 6.8 years ago by Jeremy Goecks2.2k
0
votes
1
answer
3.2k
views
1
answer
Uploading Gz Files
written 7.7 years ago by Keith Giles50 • updated 7.7 years ago by Daniel Blankenberg ♦♦ 1.7k
0
votes
2
answers
3.2k
views
2
answers
hg38 GFF3/GTF source
cuffdiff gtf rnaseq gff3 written 2.8 years ago by danderson0
0
votes
4
answers
3.2k
views
4
answers
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